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Automated merge of next-stable branch

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Jeremy Goecks
2013-08-06 11:02:37 -04:00
parent ff56ade8b9 20196a6e19
commit 41e8df0ea5
2 changed files with 3 additions and 0 deletions
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tool_conf.xml.main
+1
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@@ -326,6 +326,7 @@
<section name="NGS: RNA Analysis" id="ngs-rna-tools">
<label text="RNA-seq" id="rna_seq" />
<tool file="ngs_rna/tophat_wrapper.xml" />
<tool file="ngs_rna/tophat2_wrapper.xml" />
<tool file="ngs_rna/cufflinks_wrapper.xml" />
<tool file="ngs_rna/cuffcompare_wrapper.xml" />
<tool file="ngs_rna/cuffmerge_wrapper.xml" />
tools/ngs_rna/tophat_wrapper.xml
+2
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@@ -3,6 +3,8 @@
<description>Find splice junctions using RNA-seq data</description>
<version_command>tophat --version</version_command>
<requirements>
<requirement type="package">samtools</requirement>
<requirement type="package">bowtie</requirement>
<requirement type="package">tophat</requirement>
</requirements>
<command interpreter="python">