opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-09-24 16:30:27 +08:00
Code Issues Packages Projects Releases Wiki Activity

Add sam_to_bam to list of tools requiring Galaxy's environment.

Browse Source 
Only a very old version of sam_to_bam required this - but I guess it is actively used on usegalaxy.org since there was a bug report from @jennaj.
This commit is contained in:
John Chilton
2017-01-27 11:39:03 -05:00
committed by Martin Cech
parent a396b280dc
commit 3dcdad9eba
1 changed files with 1 additions and 0 deletions
Download Patch File Download Diff File Expand all files Collapse all files
lib/galaxy/tools/__init__.py
+1
View File
@@ -133,6 +133,7 @@ GALAXY_LIB_TOOLS = [
"sam_pileup",
"find_diag_hits",
"cufflinks",
"sam_to_bam", # This was fixed with version 1.1.3 of the tool - TODO add Galaxy to PYTHONPATH only for older versions
# Tools improperly migrated to the tool shed (iuc)
"tabular_to_dbnsfp",
]