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Add Graph2 output dataset when "-read_trkg yes".

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This commit is contained in:
Nicola Soranzo
2014-10-28 17:15:39 +01:00
parent 0af9b67d07
commit 3c60edfda7
1 changed files with 4 additions and 1 deletions
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tools/sr_assembly/velvetg.xml
+4 -1
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@@ -95,7 +95,7 @@
<when value="yes"/>
</conditional>
<param name="read_trkg" type="boolean" checked="false" truevalue="-read_trkg yes" falsevalue="-read_trkg no" label="track short read positions" help=" tracking of short read positions in assembly"/>
<param name="read_trkg" type="boolean" checked="false" truevalue="-read_trkg yes" falsevalue="-read_trkg no" label="Tracking of short read positions in assembly" help="Generates Graph2 dataset" />
<conditional name="coverage">
<param name="cutoff" type="select" label="Coverage cutoff" help="">
@@ -168,6 +168,9 @@
</conditional>
</inputs>
<outputs>
<data format="txt" name="Graph2" label="${tool.name} on ${on_string}: Graph2" from_work_dir="Graph2">
<filter>read_trkg is True</filter>
</data>
<data format="txt" name="LastGraph" label="${tool.name} on ${on_string}: LastGraph" from_work_dir="LastGraph">
<filter>last_graph['generate_graph'] == "yes"</filter>
</data>