Update ml interactive tools

tools/interactive/interactivetool_ml_jupyter_notebook.xml

@@ -22,23 +22,30 @@
         mkdir -p ./jupyter/outputs/ &&
         mkdir -p ./jupyter/data &&
         mkdir -p ./jupyter/notebooks &&
+        mkdir -p ./jupyter/elyra &&
 
         #set $cleaned_name = re.sub('[^\w\-\.]', '_', str($input.element_identifier))
         ln -sf '$input' './jupyter/data/${cleaned_name}' &&
 
         ## change into the directory where the notebooks are located
-        cp /home/\$NB_USER/notebooks/*.ipynb ./jupyter/notebooks/ &&
         cd ./jupyter/ &&
         export HOME=/home/\$NB_USER/ &&
         export PATH=/home/\$NB_USER/.local/bin:\$PATH &&
-        chown -R \$NB_USER:users `pwd` &&
 	#if $mode.mode_select == 'scratch':
-	    cp '$__tool_directory__/home_page.ipynb' ./home_page.ipynb &&
+	    ## copy all notebooks, workflows and data
+	    cp /home/\$NB_USER/home_page.ipynb ./ &&
+            cp /home/\$NB_USER/notebooks/*.ipynb ./notebooks/ &&
+            cp /home/\$NB_USER/elyra/*.* ./elyra/ &&
+            cp /home/\$NB_USER/data/*.tsv ./data/ &&
+            ## provide all rights to copied files
+	    chown -R \$NB_USER:users `pwd` &&
             chown \$NB_USER ./home_page.ipynb &&
+            chown \$NB_USER ./notebooks/*.ipynb &&
+            chown \$NB_USER ./elyra/*.* &&
             jupyter trust ./home_page.ipynb &&
-            
+            jupyter trust ./notebooks/*.ipynb &&
+            jupyter trust ./elyra/*.ipynb &&
             jupyter lab --allow-root --no-browser --NotebookApp.shutdown_button=True
-	    ##/usr/local/bin/start-notebook.sh
 	#end if
     ]]>
     </command>