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fix unit tests

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This commit is contained in:
Nate Coraor
2008-04-15 22:33:51 +00:00
parent 9bca1b9db2
commit 2957b18b8c
1 changed files with 13 additions and 12 deletions
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lib/galaxy/jobs/runners/sge.py
+13 -12
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@@ -14,18 +14,19 @@ except:
log = logging.getLogger( __name__ )
DRMAA_state = {
DRMAA.Session.UNDETERMINED: 'process status cannot be determined',
DRMAA.Session.QUEUED_ACTIVE: 'job is queued and waiting to be scheduled',
DRMAA.Session.SYSTEM_ON_HOLD: 'job is queued and in system hold',
DRMAA.Session.USER_ON_HOLD: 'job is queued and in user hold',
DRMAA.Session.USER_SYSTEM_ON_HOLD: 'job is queued and in user and system hold',
DRMAA.Session.RUNNING: 'job is running',
DRMAA.Session.SYSTEM_SUSPENDED: 'job is system suspended',
DRMAA.Session.USER_SUSPENDED: 'job is user suspended',
DRMAA.Session.DONE: 'job finished normally',
DRMAA.Session.FAILED: 'job finished, but failed',
}
if DRMAA is not None:
DRMAA_state = {
DRMAA.Session.UNDETERMINED: 'process status cannot be determined',
DRMAA.Session.QUEUED_ACTIVE: 'job is queued and waiting to be scheduled',
DRMAA.Session.SYSTEM_ON_HOLD: 'job is queued and in system hold',
DRMAA.Session.USER_ON_HOLD: 'job is queued and in user hold',
DRMAA.Session.USER_SYSTEM_ON_HOLD: 'job is queued and in user and system hold',
DRMAA.Session.RUNNING: 'job is running',
DRMAA.Session.SYSTEM_SUSPENDED: 'job is system suspended',
DRMAA.Session.USER_SUSPENDED: 'job is user suspended',
DRMAA.Session.DONE: 'job finished normally',
DRMAA.Session.FAILED: 'job finished, but failed',
}
sge_template = """#!/bin/sh
#$ -S /bin/sh