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Allow spaces in step labels

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This commit is contained in:
mvdbeek
2020-02-04 20:24:15 +01:00
parent 50f704ea23
commit 2804f5e17f
2 changed files with 2 additions and 2 deletions
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lib/galaxy/managers/markdown_parse.py
+1 -1
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@@ -33,7 +33,7 @@ INVOCATION_SECTIONS = [
ALL_CONTAINER_TYPES = GALAXY_FLAVORED_MARKDOWN_CONTAINERS + INVOCATION_SECTIONS
GALAXY_FLAVORED_MARKDOWN_CONTAINER_REGEX = "(%s)" % "|".join(ALL_CONTAINER_TYPES)
ARG_VAL_REGEX = r'''[\w_\-]+|\"[^\"]+\"|\'[^\']+\''''
ARG_VAL_REGEX = r'''[\w\s_\-]+|\"[^\"]+\"|\'[^\']+\''''
FUNCTION_ARG = r'\s*\w+\s*=\s*(?:%s)\s*' % ARG_VAL_REGEX
FUNCTION_CALL_LINE_TEMPLATE = r'\s*%s\s*\((?:' + FUNCTION_ARG + r')?\)\s*'
GALAXY_MARKDOWN_FUNCTION_CALL_LINE = re.compile(FUNCTION_CALL_LINE_TEMPLATE % GALAXY_FLAVORED_MARKDOWN_CONTAINER_REGEX)
lib/galaxy/managers/markdown_util.py
+1 -1
View File
@@ -41,7 +41,7 @@ from .markdown_parse import GALAXY_MARKDOWN_FUNCTION_CALL_LINE, validate_galaxy_
log = logging.getLogger(__name__)
ARG_VAL_CAPTURED_REGEX = r'''(?:([\w_\-]+)|\"([^\"]+)\"|\'([^\']+)\')'''
ARG_VAL_CAPTURED_REGEX = r'''(?:([\w\s_\-]+)|\"([^\"]+)\"|\'([^\']+)\')'''
OUTPUT_LABEL_PATTERN = re.compile(r'output=\s*%s\s*' % ARG_VAL_CAPTURED_REGEX)
INPUT_LABEL_PATTERN = re.compile(r'input=\s*%s\s*' % ARG_VAL_CAPTURED_REGEX)
STEP_LABEL_PATTERN = re.compile(r'step=\s*%s\s*' % ARG_VAL_CAPTURED_REGEX)