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Some more type fixes

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This commit is contained in:
mvdbeek
2021-11-29 11:12:24 +01:00
parent 29a525156e
commit 1f7a2e274c
2 changed files with 5 additions and 5 deletions
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lib/galaxy/tools/evaluation.py
+1 -1
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@@ -684,7 +684,7 @@ class RemoteToolEvaluator(ToolEvaluator):
def __init__(self, app, tool, job, local_working_directory, job_io: JobIO):
super().__init__(app, tool, job, local_working_directory)
self.job_io = job_io
self._compute_environment = None
self._compute_environment: Optional[SharedComputeEnvironment] = None
@property
def compute_environment(self):
test/unit/app/tools/test_metadata.py
+4 -4
View File
@@ -179,10 +179,10 @@ class MetadataTestCase(unittest.TestCase, tools_support.UsesTools):
def _write_job_files(self, stdout="tool stdout", stderr="tool stderr"):
with open(os.path.join(self.job_working_directory, "tool_script.sh"), 'w') as f:
f.write("echo hi")
with open(os.path.join(self.job_working_directory, "tool_stdout"), "wb") as f:
f.write(stdout.encode("utf-8"))
with open(os.path.join(self.job_working_directory, "tool_stderr"), "wb") as f:
f.write(stderr.encode("utf-8"))
with open(os.path.join(self.job_working_directory, "tool_stdout"), "w") as f:
f.write(stdout)
with open(os.path.join(self.job_working_directory, "tool_stderr"), "w") as f:
f.write(stderr)
def metadata_command(self, output_datasets, output_collections=None):
output_collections = output_collections or {}