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Fix for hyperlinks for UCSC table browser direct connection.

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Daniel Blankenberg
2007-03-08 16:35:58 +00:00
parent 078389e8f0
commit 1ebbc0c583
1 changed files with 1 additions and 1 deletions
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tools/data_source/ucsc_tablebrowser_code.py
+1 -1
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@@ -5,7 +5,7 @@ def exec_before_job( trans, inp_data, out_data, param_dict, tool=None):
"""Sets the name of the data"""
outputType = param_dict.get( 'hgta_outputType', "interval" ) #assume all data is interval, we will fix later if not the case
#list for converting ucsc to galaxy exts, if not in here, use raw reported value
outputType_to_ext = {'wigData':'wig','tab':'interval'}
outputType_to_ext = {'wigData':'wig','tab':'interval','hyperlinks':'html'}
items = out_data.items()
description = param_dict.get('hgta_regionType',"")
organism = param_dict.get('org',"unkown species")