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Change the way GMAJ peeks are generated. A non-escaped ©_access_from was being modified to
'©_access_from'.
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@@ -5,7 +5,7 @@ Image classes
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import data
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import logging
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from galaxy.datatypes.sniff import *
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from urllib import urlencode
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from urllib import urlencode, quote_plus
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import zipfile
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log = logging.getLogger(__name__)
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@@ -112,7 +112,7 @@ class Gmaj( data.Data ):
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"nobutton": "false",
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"urlpause" :"100",
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"debug": "false",
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"posturl": "history_add_to?%s" % urlencode( { 'history_id': dataset.history_id, 'ext': 'maf', 'name': 'GMAJ Output on data %s' % dataset.hid, 'info': 'Added by GMAJ', 'dbkey': dataset.dbkey, 'copy_access_from': dataset.id } )
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"posturl": quote_plus( "history_add_to?%s" % "&".join( [ "%s=%s" % ( key, value ) for key, value in { 'history_id': dataset.history_id, 'ext': 'maf', 'name': 'GMAJ Output on data %s' % dataset.hid, 'info': 'Added by GMAJ', 'dbkey': dataset.dbkey, 'copy_access_from': dataset.id }.items() ] ) )
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}
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class_name = "edu.psu.bx.gmaj.MajApplet.class"
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archive = "/static/gmaj/gmaj.jar"
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@@ -186,7 +186,7 @@ class Laj( data.Text ):
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"alignfile1": "display?id=%s" % dataset.id,
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"buttonlabel": "Launch LAJ",
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"title": "LAJ in Galaxy",
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"posturl": "history_add_to?%s" % urlencode( { 'history_id': dataset.history_id, 'ext': 'lav', 'name': 'LAJ Output', 'info': 'Added by LAJ', 'dbkey': dataset.dbkey, 'copy_access_from': dataset.id } ),
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"posturl": quote_plus( "history_add_to?%s" % "&".join( [ "%s=%s" % ( key, value ) for key, value in { 'history_id': dataset.history_id, 'ext': 'lav', 'name': 'LAJ Output', 'info': 'Added by LAJ', 'dbkey': dataset.dbkey, 'copy_access_from': dataset.id }.items() ] ) ),
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"noseq": "true"
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}
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class_name = "edu.psu.cse.bio.laj.LajApplet.class"
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