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Co-authored-by: Marius van den Beek <m.vandenbeek@gmail.com>
This commit is contained in:
Alexandru Mahmoud
2021-05-04 13:57:06 -04:00
committed by GitHub
co-authored by Marius van den Beek
parent caa482115e
commit 10b5bfb572
1 changed files with 1 additions and 1 deletions
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lib/galaxy/jobs/runners/kubernetes.py
+1 -1
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@@ -405,7 +405,7 @@ class KubernetesJobRunner(AsynchronousJobRunner):
# command line execution, separated by ;, which is what Galaxy does
# to assemble the command.
"command": [ajs.job_wrapper.shell],
"args": ["-c", ajs.job_file], # "source /galaxy/server/.venv/bin/activate && {}".format(ajs.job_file)],
"args": ["-c", ajs.job_file],
"workingDir": ajs.job_wrapper.working_directory,
"volumeMounts": self.runner_params['k8s_volume_mounts']
}