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remove previous version of sniff

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This commit is contained in:
Lucille Delisle
2022-11-23 11:50:28 +01:00
parent 5840654280
commit 1000c67cb5
1 changed files with 0 additions and 7 deletions
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lib/galaxy/datatypes/interval.py
-7
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@@ -1760,13 +1760,6 @@ class IntervalTabix(Interval):
# We don't want to have a good sniff as the index would be created before the metadata on columns is set.
def sniff_prefix(self, file_prefix: FilePrefix):
return False
# # Check that the file is compressed with bgzip (not gzip), i.e. the
# # compressed format is BGZF, as explained in
# # http://samtools.github.io/hts-specs/SAMv1.pdf
# with open(filename, "rb") as fh:
# fh.seek(-28, 2)
# last28 = fh.read()
# return binascii.hexlify(last28) == b"1f8b08040000000000ff0600424302001b0003000000000000000000"
# Ideally the tabix_index would be regenerated when the metadataElements are updated
def set_meta(self, dataset, overwrite=True, first_line_is_header=False, metadata_tmp_files_dir=None, **kwd):