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Fix extra index URL call in common startup.

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- Use it for dev requirements also.
- Use more correct API target that supports older versions of dependencies on PyPI.

xref https://gist.github.com/jmchilton/ad8f180f5ac1eb5f689f815b04f603fa
This commit is contained in:
John Chilton
2017-10-30 10:49:29 -04:00
parent 5016a2d525
commit 09fdac513d
1 changed files with 4 additions and 3 deletions
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scripts/common_startup.sh
+4 -3
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@@ -134,17 +134,18 @@ if [ $SET_VENV -eq 1 ]; then
fi
: ${GALAXY_WHEELS_INDEX_URL:="https://wheels.galaxyproject.org/simple"}
: ${PYPI_INDEX_URL:="https://pypi.python.org/simple"}
if [ $REPLACE_PIP -eq 1 ]; then
pip install 'pip>=8.1'
fi
if [ $FETCH_WHEELS -eq 1 ]; then
pip install -r requirements.txt --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url https://pypi.python.org/pypi
pip install -r requirements.txt --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url "${PYPI_INDEX_URL}"
GALAXY_CONDITIONAL_DEPENDENCIES=$(PYTHONPATH=lib python -c "import galaxy.dependencies; print '\n'.join(galaxy.dependencies.optional('$GALAXY_CONFIG_FILE'))")
[ -z "$GALAXY_CONDITIONAL_DEPENDENCIES" ] || echo "$GALAXY_CONDITIONAL_DEPENDENCIES" | pip install -r /dev/stdin --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url https://pypi.python.org/pypi
[ -z "$GALAXY_CONDITIONAL_DEPENDENCIES" ] || echo "$GALAXY_CONDITIONAL_DEPENDENCIES" | pip install -r /dev/stdin --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url "${PYPI_INDEX_URL}"
fi
if [ $FETCH_WHEELS -eq 1 -a $DEV_WHEELS -eq 1 ]; then
dev_requirements='./lib/galaxy/dependencies/dev-requirements.txt'
[ -f $dev_requirements ] && pip install -r $dev_requirements --index-url "${GALAXY_WHEELS_INDEX_URL}"
[ -f $dev_requirements ] && pip install -r $dev_requirements --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url "${PYPI_INDEX_URL}"
fi