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Merge pull request #10367 from natefoo/defer-metadata-strategy-resolution
[20.09] Defer metadata strategy resolution in job wrapper
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@@ -911,19 +911,26 @@ class JobWrapper(HasResourceParameters):
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if use_persisted_destination:
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self.job_runner_mapper.cached_job_destination = JobDestination(from_job=job)
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# Wrapper holding the info required to restore and clean up from files used for setting metadata externally
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try:
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metadata_strategy_override = self.get_destination_configuration('metadata_strategy', None)
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except JobMappingException:
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metadata_strategy_override = None
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if job.tasks:
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metadata_strategy_override = "directory"
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self.external_output_metadata = get_metadata_compute_strategy(self.app.config, job.id, metadata_strategy_override=metadata_strategy_override, tool_id=job.tool_id)
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self.__external_output_metadata = None
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self.__has_tasks = bool(job.tasks)
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self.__commands_in_new_shell = True
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self.__user_system_pwent = None
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self.__galaxy_system_pwent = None
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self.__working_directory = None
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@property
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def external_output_metadata(self):
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if self.__external_output_metadata is None:
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try:
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metadata_strategy_override = self.get_destination_configuration('metadata_strategy', None)
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except JobMappingException:
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metadata_strategy_override = None
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if self.__has_tasks:
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metadata_strategy_override = "directory"
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self.__external_output_metadata = get_metadata_compute_strategy(self.app.config, self.job_id, metadata_strategy_override=metadata_strategy_override, tool_id=self.tool.id)
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return self.__external_output_metadata
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@property
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def _job_dataset_path_rewriter(self):
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if self._dataset_path_rewriter is None:
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