fix(cli): keep run_commands timeout out of session config

sdk/apps/cli/src/acp/acpAgent.ts

@@ -26,7 +26,6 @@ import {
 	type ClineCore,
 	Llms,
 	ProviderSettingsManager,
-	readGlobalSettings,
 	SessionSource,
 } from "@cline/core";
 import type { Message } from "@cline/shared";
@@ -534,7 +533,6 @@ export class AcpAgent implements Agent {
 			mode: session.currentMode,
 			defaultToolAutoApprove: false,
 			toolPolicies: { "*": { autoApprove: false } },
-			runCommandsTimeoutMs: readGlobalSettings().runCommandsTimeoutMs ?? 30000,
 			enableSpawnAgent: true,
 			enableAgentTeams: false,
 			enableTools: true,

sdk/apps/cli/src/main.ts

@@ -118,7 +118,6 @@ export async function runCli(): Promise<void> {
 		setClineDir(configDir);
 	}
 	setHomeDir(homedir());
-	const { readGlobalSettings } = await import("@cline/core");
 
 	// Capture activation telemetry only after config/home directory selection
 	// has been applied, so the telemetry singleton's persisted distinct-id
@@ -864,7 +863,6 @@ export async function runCli(): Promise<void> {
 		});
 
 		const config: Config = {
-			runCommandsTimeoutMs: readGlobalSettings().runCommandsTimeoutMs,
 			providerId: provider,
 			modelId:
 				args.model ??

sdk/apps/cli/src/runtime/run-interactive.ts

@@ -583,7 +583,6 @@ export async function runInteractive(
 				...readGlobalSettings(),
 				runCommandsTimeoutMs: timeoutMs,
 			});
-			config.runCommandsTimeoutMs = timeoutMs;
 			await sessionRuntime.ensureReady();
 			await sessionRuntime.restartWithCurrentMessages();
 		},

sdk/apps/cli/src/utils/types.ts

@@ -30,7 +30,6 @@ export interface Config extends Omit<CoreSessionConfig, "apiKey" | "mode"> {
 	mode: CliAgentMode;
 	defaultToolAutoApprove: boolean;
 	toolPolicies: Record<string, ToolPolicy>;
-	runCommandsTimeoutMs: number;
 }
 
 export interface ActiveCliSession {

sdk/packages/core/src/extensions/tools/index.ts

@@ -178,6 +178,8 @@ export function createBuiltinTools(
 
 	return createDefaultTools({
 		...toolsConfig,
+		bashTimeoutMs:
+			toolsConfig.bashTimeoutMs ?? executorOptions.bash?.timeoutMs,
 		executors,
 	});
 }

sdk/packages/core/src/runtime/orchestration/runtime-builder.ts

@@ -109,7 +109,6 @@ function createBuiltinToolsList(
 		createBuiltinTools({
 			cwd,
 			...preset,
-			bashTimeoutMs: runCommandsTimeoutMs,
 			enableSkills: !!skillsExecutor,
 			...toolRoutingConfig,
 			executorOptions: {