Dave Bouvier 83af05b1f2 Migrate 46 tools from the distribution to the tool shed: gatk, gops, regional variation.

2014-04-01 11:04:32 -04:00

..

shared

Rename ucsc_build_sites.txt to .sample.

2014-02-27 16:37:48 -05:00

add_scores.loc.sample

python version of "phyloP interspecies conservation scores" tool

2011-11-30 12:05:59 -05:00

alignseq.loc.sample

Added more information to the sample .loc files, fixed a typo in extract genomic dna tool.

2008-06-30 18:02:53 +00:00

all_fasta.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

annotation_profiler_options.xml.sample

Update annotation profiler tool sample configuration file.

2011-07-07 12:13:49 -04:00

annotation_profiler_valid_builds.txt.sample

Adding a new parameter type drill_down. This parameter type creates a hierarchical set of checkboxes or radiobuttons.

2008-05-07 17:10:35 +00:00

bfast_indexes.loc.sample

Add BFAST Mapper tool and wrapper.

2010-08-18 16:52:06 -04:00

binned_scores.loc.sample

Added more information to the sample .loc files, fixed a typo in extract genomic dna tool.

2008-06-30 18:02:53 +00:00

blastdb_p.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

blastdb.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

codingSnps.loc.sample

Initial checkin of Human Genome Variation tools

2010-09-14 18:20:15 -04:00

encode_datasets.loc.sample

Commenting data lines in .loc.sample tool-data files so tools will not throw exceptions.

2008-04-03 14:31:16 +00:00

faseq.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

fastx_clipper_sequences.txt

Updating FASTX tool-set to the latest version v0.0.10

2009-09-14 17:03:17 -04:00

funDo.loc.sample

Fixed sample .loc file for FunDO tool

2010-09-16 15:29:51 -04:00

liftOver.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

maf_index.loc.sample

Rewrite of dynamic options for select lists. There are no more 'special cases' and new filters are much easier to incorporate, as neeeded.

2008-05-29 17:38:46 +00:00

maf_pairwise.loc.sample

Rewrite of dynamic options for select lists. There are no more 'special cases' and new filters are much easier to incorporate, as neeeded.

2008-05-29 17:38:46 +00:00

microbial_data.loc.sample

Commenting data lines in .loc.sample tool-data files so tools will not throw exceptions.

2008-04-03 14:31:16 +00:00

mosaik_index.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

ngs_sim_fasta.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

perm_base_index.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

perm_color_index.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

phastOdds.loc.sample

Added more information to the sample .loc files, fixed a typo in extract genomic dna tool.

2008-06-30 18:02:53 +00:00

picard_index.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

quality_scores.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

regions.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

sequence_index_base.loc.sample

Updated several sample index loc files to make it clearer how the actual loc files should appear

2009-10-07 15:31:18 -04:00

sequence_index_color.loc.sample

Updated several sample index loc files to make it clearer how the actual loc files should appear

2009-10-07 15:31:18 -04:00

sift_db.loc.sample

Initial checkin of Human Genome Variation tools

2010-09-14 18:20:15 -04:00

srma_index.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00

twobit.loc.sample

Convert loc file examples to use tabs instead of spaces.

2012-03-23 08:59:34 -04:00