Jeremy Goecks 9c7065d898 Make VCF (variant call format) a Galaxy datatype and enable very basic VCF support in trackster. VCF datatype is sniffable and can be converted to summary tree and interval index. In trackster, VCF files are represented as single-base pair feature tracks.

2010-10-06 16:23:55 -04:00

..

__init__.py

Add a new FASTQ tool suite. Four FASTQ variants are supported: sanger, illumina, solexa and solid.

2010-02-23 16:48:07 -05:00

fasta.py

Change color space FASTA file type from fastqsolid to fastqcssanger.

2010-03-02 10:47:23 -05:00

fastq.py

Allow FASTQ Groomer/parser to work on tab-delimited decimal scores.

2010-05-24 15:33:55 -04:00

sequence.py

Add a new FASTQ tool suite. Four FASTQ variants are supported: sanger, illumina, solexa and solid.

2010-02-23 16:48:07 -05:00

transform.py

Bug fix for signature of lib.galaxy_utils.sequence.transform.?NA_reverse_complement method.

2010-10-01 10:45:17 -04:00

vcf.py

Make VCF (variant call format) a Galaxy datatype and enable very basic VCF support in trackster. VCF datatype is sniffable and can be converted to summary tree and interval index. In trackster, VCF files are represented as single-base pair feature tracks.

2010-10-06 16:23:55 -04:00