Jianbin He eb758843a4 add dbkey for test

2007-03-13 19:07:13 +00:00

..

kaks

yn00 binary added

2007-02-19 19:21:38 +00:00

aggregate_binned_scores_in_intervals_code.py

Remove last references to /depot/data1/cache.

2007-01-03 19:36:07 +00:00

aggregate_binned_scores_in_intervals.py

Fix aggregate binned scores in intervals. This tool could definitly use more friendly error messages.

2007-01-16 17:36:00 +00:00

aggregate_binned_scores_in_intervals.xml

add dbkey for test

2007-03-13 19:07:13 +00:00

aggregate_scores_in_intervals.py

score aggregate tool for .wig files

2007-01-22 20:28:36 +00:00

aggregate_scores_in_intervals.xml

Removing import psyco_full from tools that throw warning (already imported).

2007-02-23 14:33:03 +00:00

column_maker.py

Enhanced column_maker.py to gracefully handle invalid data in input file and to display more meaningful info to user.

2007-02-28 16:10:31 +00:00

column_maker.xml

Enhanced column_maker.py to gracefully handle invalid data in input file and to display more meaningful info to user.

2007-02-28 16:10:31 +00:00

cor.py

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

cor.xml

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

correlation.pl

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

correlation.xml

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

filtering.py

Corrected the way these tools read input datasets to keep them from entering infinite loops if the dataset is empty.

2007-02-27 16:32:05 +00:00

filtering.xml

Added another example since I noticed several jobs where the user was confused about the "==" requirement.

2007-02-26 20:43:31 +00:00

gsummary.py

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

gsummary.xml

change keyword 'value' to 'file' for test_toolbox

2007-03-13 15:20:46 +00:00

gsummary.xml.groups

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

kaks_yn00.py

Filename test_kaks.py changed to kaks_yn00.py

2007-02-19 19:34:26 +00:00

kaks.xml

Filename test_kaks.py changed to kaks_yn00.py

2007-02-19 19:34:26 +00:00

test_kaks.py

new toold kaks added

2007-02-16 21:28:21 +00:00

wiggle_to_simple.py

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

wiggle_to_simple.xml

Moving james-wsgi branch to new trunk.

2006-11-15 16:28:21 +00:00

yn00

yn00 binary added: kaks tool

2007-02-16 21:37:34 +00:00

yn00.ctl

Added new tool: kaks (computes the ratio of nonsynonymous substitutions to synonymous substitutions for all the sequence alignments in the input

2007-02-12 21:38:36 +00:00