mirror of
https://github.com/galaxyproject/galaxy.git
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82 lines
2.5 KiB
YAML
82 lines
2.5 KiB
YAML
name: Tool framework tests
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on:
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push:
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paths:
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- '**'
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- '!client/**'
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- '!doc/**'
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- '!lib/galaxy_test/selenium/**'
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- '!packages/test_selenium/**'
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- '!.github/workflows/**'
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- '.github/workflows/framework_tools.yaml'
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pull_request:
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paths:
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- '**'
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- '!client/**'
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- '!doc/**'
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- '!lib/galaxy_test/selenium/**'
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- '!packages/test_selenium/**'
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- '!.github/workflows/**'
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- '.github/workflows/framework_tools.yaml'
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schedule:
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# Run at midnight UTC every Tuesday
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- cron: '0 0 * * 2'
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env:
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GALAXY_TEST_DBURI: 'postgresql+psycopg://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8'
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GALAXY_TEST_RAISE_EXCEPTION_ON_HISTORYLESS_HDA: '1'
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concurrency:
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group: ${{ github.workflow }}-${{ github.ref }}
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cancel-in-progress: true
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permissions: {}
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jobs:
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test:
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if: >-
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github.event_name != 'push'
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|| github.repository_owner != 'galaxyproject'
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|| github.ref_name == 'dev'
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|| startsWith(github.ref_name, 'release_')
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name: Test
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runs-on: ubuntu-latest
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strategy:
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fail-fast: false
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matrix:
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python-version: ['3.10']
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use-legacy-api: ['never', 'always']
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services:
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postgres:
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image: postgres:18
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env:
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POSTGRES_USER: postgres
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POSTGRES_PASSWORD: postgres
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POSTGRES_DB: postgres
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ports:
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- 5432:5432
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steps:
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- if: github.event_name == 'schedule'
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run: |
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echo "GALAXY_CONFIG_OVERRIDE_METADATA_STRATEGY=extended" >> $GITHUB_ENV
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echo "GALAXY_CONFIG_OVERRIDE_OUTPUTS_TO_WORKING_DIRECTORY=true" >> $GITHUB_ENV
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- uses: actions/checkout@v7.0.1
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with:
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path: 'galaxy root'
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persist-credentials: false
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- name: Install uv
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uses: astral-sh/setup-uv@v10.2.0
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with:
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version-file: galaxy root/.tool-versions
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python-version: ${{ matrix.python-version }}
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- name: Install Python
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run: uv python install
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- name: Run tests
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run: GALAXY_TEST_USE_LEGACY_TOOL_API="${{ matrix.use-legacy-api }}" ./run_tests.sh --coverage --framework-tools
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working-directory: 'galaxy root'
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- uses: codecov/codecov-action@v7.1.1
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with:
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flags: framework
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working-directory: 'galaxy root'
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- uses: actions/upload-artifact@v7
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if: failure()
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with:
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name: Tool framework test results (${{ matrix.python-version }})
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path: 'galaxy root/run_framework_tests.html'
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