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https://github.com/galaxyproject/galaxy.git
synced 2026-09-21 13:50:20 +08:00
Daniel Blankenberg
b2e2b801ea
greater than config.output_size_limit, no data will be retrieved and an error message will be provided to the user. Tools using this script have been updated to provide the max file size on the command line. Resolves ticket #93.
31 lines
1.7 KiB
XML
31 lines
1.7 KiB
XML
<?xml version="1.0"?>
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<!--
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If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
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the initial response. If value of 'URL_method' is 'post', any additional params coming back in the
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initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
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-->
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<tool name="Flymine" id="flymine" tool_type="data_source" URL_method="post">
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<description>server</description>
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<command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
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<inputs action="http://www.flymine.org" check_values="false" method="get" target="_top">
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<display>go to Flymine server $GALAXY_URL</display>
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<param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=flymine" />
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</inputs>
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<request_param_translation>
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<request_param galaxy_name="URL" remote_name="URL" missing="" />
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<request_param galaxy_name="dbkey" remote_name="db" missing="?" />
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<request_param galaxy_name="organism" remote_name="organism" missing="" />
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<request_param galaxy_name="table" remote_name="table" missing="" />
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<request_param galaxy_name="description" remote_name="description" missing="" />
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<request_param galaxy_name="name" remote_name="name" missing="FlyMine query" />
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<request_param galaxy_name="info" remote_name="info" missing="" />
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<request_param galaxy_name="data_type" remote_name="data_type" missing="txt" />
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</request_param_translation>
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<uihints minwidth="800"/>
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<outputs>
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<data name="output" format="txt" />
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</outputs>
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<options sanitize="False" refresh="True"/>
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</tool>
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