Matthias Bernt ee4c5d0817 deprecate data manager version ...

Data managers (DM) could define a version for the data manager
(`<data_manager version="0.0.1">`) and for the data manager tool (DMT).

The version attribute of the data manager was undocumented and only
used seldomly (for IUC in 24 out of 88). If no version was set for
the DM it defaults to 0.0.1. Hence in `shed_data_manager_conf.xml`
multiple versions of the (DM) with version 0.0.1 are listed.

This leads to loading only one DM (I guess the oldest) and a
warning like the following on startup:

`A data manager has been defined twice: toolshed.g2.bx.psu.edu/repos/galaxyp/data_manager_eggnog_mapper/data_manager/data_manager_eggnog/0.0.1 `

which is easily overlooked.

2021-07-14 15:24:38 +02:00

..

api_guidelines.rst

Apply suggestions from code review

2021-01-13 18:19:29 -05:00

build_a_job_runner.rst

Minor fixes to docs on how to build a job runner

2020-05-09 22:14:00 +05:30

data_managers_schematic_overview.png

Add remove operation to data managers and document data managers in regular Galaxy docs.

2019-06-28 20:02:37 +02:00

data_managers.rst

deprecate data manager version

2021-07-14 15:24:38 +02:00

data_types.md

Don't allow datatype change by default if it's composite

2020-09-24 09:39:58 +01:00

debugging_galaxy.md

Update instructions for debugging using vscode

2021-01-29 17:15:42 +01:00

debugging_tests.md

Apply suggestions from code review

2020-04-27 16:08:48 -04:00

faq.rst

Fix documentation more, spread data managers documentation over multiple lines so it's easier to read when editing.

2019-08-24 11:56:47 +02:00

file_upload.md

Updated documentation to show how a job is de-qued and processed.

2020-09-03 11:33:20 -04:00

finding_and_improving_slow_code.rst

Fix documentation more, spread data managers documentation over multiple lines so it's easier to read when editing.

2019-08-24 11:56:47 +02:00

index.rst

API design guidelines.

2021-01-13 18:18:39 -05:00

inherit.png

Add and use local images for build runner doc

2016-10-24 19:40:42 +01:00

interactive_environments_success.png

Move png in the right directory

2016-10-24 19:40:41 +01:00

interactive_environments.rst

Merge pull request #9194 from hexylena/user-rename

2020-01-09 11:32:53 -05:00

queue_b.png

Add and use local images for build runner doc

2016-10-24 19:40:42 +01:00

queue.png

Add and use local images for build runner doc

2016-10-24 19:40:42 +01:00

run_tests_help.txt

Documentation on writing Galaxy tests.

2021-01-10 18:52:26 -05:00

runner_diag.png

Add and use local images for build runner doc

2016-10-24 19:40:42 +01:00

starting_galaxy.md

Removed trailing whitespace

2020-06-25 15:31:39 -04:00

tests.png

Added doc pages for debugging tests and Galaxy.

2020-04-24 16:27:43 -04:00

writing_tests.md

Link to some recently filled out pydocs from sphinx testing docs.

2021-01-18 17:24:28 -05:00