mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-21 13:50:20 +08:00
58 lines
2.1 KiB
Python
58 lines
2.1 KiB
Python
import os
|
|
|
|
#--------read tool_conf.xml to get all the tool xml file names-----------
|
|
onoff = 1
|
|
tool_list = []
|
|
for line in open("tool_conf.xml", "r"):
|
|
if line.find("<!--") != -1:
|
|
onoff = 0
|
|
if line.find("file") != -1 and onoff==1:
|
|
strs = line.split('\"')
|
|
tool_list.append(strs[1])
|
|
if line.find("<section") != -1 and onoff==1:
|
|
keys = line.strip().split('\"')
|
|
n = 0
|
|
strtmp = "section::"
|
|
while n < len(keys) :
|
|
if keys[n].find("id") != -1 : strtmp = strtmp + keys[n+1]
|
|
if keys[n].find("name") != -1 : strtmp = strtmp + keys[n+1] + "-"
|
|
n = n + 1
|
|
tool_list.append(strtmp)
|
|
if line.find("-->") != -1:
|
|
onoff =1
|
|
|
|
#-------read tool info from every tool xml file--------------------------
|
|
name = []
|
|
id = []
|
|
desc = []
|
|
tool_infos = []
|
|
for tool in tool_list :
|
|
if tool.find("section")!=-1 :
|
|
tool_info = dict()
|
|
tool_info["id"] = tool
|
|
tool_infos.append(tool_info)
|
|
if os.path.exists("tools/"+tool) :
|
|
for line in open("tools/"+tool) :
|
|
if line.find("<tool ") != -1 and line.find("id") != -1 :
|
|
keys = line.strip().split('\"')
|
|
n = 0
|
|
tool_info = dict()
|
|
tool_info["desc"] = ''
|
|
while n < len(keys) :
|
|
if keys[n].find("id") != -1 : tool_info["id"] = keys[n+1].replace(' ', '_')
|
|
if keys[n].find("name") != -1 : tool_info["name"] = keys[n+1]
|
|
if keys[n].find("description") != -1 : tool_info["desc"] = keys[n+1]
|
|
n = n + 1
|
|
tool_infos.append(tool_info)
|
|
break
|
|
for tool_info in tool_infos:
|
|
if tool_info["id"].find("section") != -1 :
|
|
print "==========================================================================================================================================="
|
|
print "%-45s\t%-40s\t%s" % ("id", "name", tool_info["id"])
|
|
print "- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -"
|
|
else :
|
|
print "%-45s\t%-40s" % (tool_info["id"], tool_info["name"])
|
|
|
|
#for key in tool_infos.keys():
|
|
# print tool_infos[key]["id"], "\t", tool_infos[key]["name"], "\t", tool_infos[key]["desc"]
|