mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-16 07:19:13 +08:00
Helena RascheandMarius van den Beek
18a5ac20d0
Thanks! Co-authored-by: Marius van den Beek <m.vandenbeek@gmail.com>
64 lines
2.0 KiB
YAML
64 lines
2.0 KiB
YAML
name: Integration
|
|
on: [push, pull_request]
|
|
env:
|
|
GALAXY_TEST_DBURI: 'postgres://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8'
|
|
GALAXY_TEST_AMQP_URL: 'amqp://localhost:5672//'
|
|
jobs:
|
|
test:
|
|
name: Test
|
|
runs-on: ubuntu-18.04
|
|
strategy:
|
|
matrix:
|
|
python-version: [3.7]
|
|
subset: ['upload_datatype', 'extended_metadata', 'kubernetes', 'not (upload_datatype or extended_metadata or kubernetes)']
|
|
services:
|
|
postgres:
|
|
image: postgres:11
|
|
env:
|
|
POSTGRES_USER: postgres
|
|
POSTGRES_PASSWORD: postgres
|
|
POSTGRES_DB: postgres
|
|
ports:
|
|
- 5432:5432
|
|
rabbitmq:
|
|
image: rabbitmq
|
|
ports:
|
|
- 5672:5672
|
|
steps:
|
|
- name: Prune unused docker image, volumes and containers
|
|
run: docker system prune -a -f
|
|
- name: Clean dotnet folder for space
|
|
if: matrix.subset == 'kubernetes'
|
|
run: rm -Rf /usr/share/dotnet
|
|
- name: Setup Minikube
|
|
if: matrix.subset == 'kubernetes'
|
|
id: minikube
|
|
uses: CodingNagger/minikube-setup-action@v1.0.3
|
|
with:
|
|
minikube-version: "1.9.0-0_amd64"
|
|
- name: Launch Minikube
|
|
if: matrix.subset == 'kubernetes'
|
|
run: eval ${{ steps.minikube.outputs.launcher }}
|
|
- name: Check pods
|
|
if: matrix.subset == 'kubernetes'
|
|
run: |
|
|
kubectl get pods
|
|
- uses: actions/checkout@v2
|
|
with:
|
|
path: 'galaxy root'
|
|
- uses: actions/setup-python@v1
|
|
with:
|
|
python-version: ${{ matrix.python-version }}
|
|
- name: Cache pip dir
|
|
uses: actions/cache@v1
|
|
id: pip-cache
|
|
with:
|
|
path: ~/.cache/pip
|
|
key: pip-cache-${{ matrix.python-version }}-${{ hashFiles('galaxy root/requirements.txt') }}
|
|
- name: Install ffmpeg
|
|
run: sudo apt-get update && sudo apt-get install ffmpeg -y
|
|
if: matrix.subset == 'upload_datatype'
|
|
- name: Run tests
|
|
run: './run_tests.sh -integration test/integration -- -k "${{ matrix.subset }}"'
|
|
working-directory: 'galaxy root'
|