mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-30 18:13:23 +08:00
Nicola Soranzo
8e8c64308a
`PIP_PROGRESS_BAR` environment variable is used by `pip` to set the value for the `--progress-bar` option. It seems that specifying it also only the command line does not override it in some configurations, e.g. on TravisCI Linux builds of BioBlend, see e.g. https://travis-ci.org/galaxyproject/bioblend/jobs/558857557
53 lines
1.1 KiB
Bash
Executable File
53 lines
1.1 KiB
Bash
Executable File
#!/bin/bash
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set -e
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# Don't display the pip progress bar when running under CI
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[ "$CI" = 'true' ] && export PIP_PROGRESS_BAR=off
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# Change to packages directory.
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cd "$(dirname "$0")"
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# Use a throw-away virtualenv
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TEST_PYTHON=${TEST_PYTHON:-"python"}
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TEST_ENV_DIR=${TEST_ENV_DIR:-$(mktemp -d -t gxpkgtestenvXXXXXX)}
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virtualenv -p "$TEST_PYTHON" "$TEST_ENV_DIR"
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. "${TEST_ENV_DIR}/bin/activate"
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pip install pytest
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# ensure ordered by dependency dag
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PACKAGE_DIRS=(
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util
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objectstore
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job_metrics
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containers
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tool_util
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data
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job_execution
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auth
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authnz
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web_stack
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web_framework
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app
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web_apps
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)
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# containers has no tests, tool_util not yet working 100%,
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# data has many problems quota, tool shed install database, etc..
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RUN_TESTS=(1 1 1 1 1 1 1 1 1 0 0 0 0)
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for ((i=0; i<${#PACKAGE_DIRS[@]}; i++)); do
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package_dir=${PACKAGE_DIRS[$i]}
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run_tests=${RUN_TESTS[$i]}
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cd "$package_dir"
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pip install -e .
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if [ "$package_dir" = "util" ]; then
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pip install -e '.[template,jstree]'
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fi
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if [[ "$run_tests" == "1" ]]; then
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pytest --doctest-modules galaxy tests
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fi
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cd ..
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done
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