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72 lines
1.8 KiB
Plaintext
72 lines
1.8 KiB
Plaintext
INTRO
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=====
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This program requires python 2.4 or later. To check your python version type:
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python -V.
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To start a server you need to do run the server as:
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python universe.py
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This will start a server on localhost port 8080.
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In your browser go to: http://localhost:8080 and you should see the
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Galaxy environment with some default tools. To customize the tools that
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are loaded see tool.conf.sample To customize the way your server is ran edit
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universe.conf
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*Note* certain tools may require certain libraries to be present.
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We have included a binary copy of galaxyOps for linux systems.
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(See run.sh for more details)
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RUNTIME ENVIRONMENT
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===================
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The default server home will be the directory where the program starts.
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You can use the UNIVERSE_HOME environment variable to point to a different
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server home. The path that the UNIVERSE_HOME variable points to must be
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a directory with the following subdirectories:
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database
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database/files
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database/import
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tools
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OPTIMIZED LIBRARIES
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===================
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To allow python to load optimized libraries the path to these must be listed
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in the python path. See the previous section or run.sh for an example. Loading
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the optimized Cheetah templating libraries can lead to significant
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performance gains.
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At startup you the log message:
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Optimized Namemapper: True|False
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will tell you whether the optimized Cheetah template was loaded (or not).
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The log message:
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database type: dbhash|....
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will tell you what kind of underlying database is the server using. Dbhash
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stands for the BerkleyDB. The server should work fine with other libraries
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as well but BerkleyDB is provides the most reliable and efficient storage.
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TOOL DEVELOPMENT
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================
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See the wiki pages for more details:
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http://g2.bx.psu.edu
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CREATING A RELEASE
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==================
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type:
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python setup.py sdist
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