Files
galaxy/test/functional/tools/composite_output.xml
T
John Chilton 1ba74094a3 Improve composite output tool test.
- Rename expected output Log from input Log. This relieves a concern I had that the tests were just working because the inputs and outputs match.
 - Add another "unregistered" output file to the output directory and add a test for it. This verifies that such files are infact tested.
 - Add a nested "unregistered" output file to the output directory and add a test for it. This verifies that nested files are tested.
2016-05-16 11:51:03 -04:00

27 lines
1.4 KiB
XML

<tool id="composite_output" name="composite_output" version="1.0.0">
<command>mkdir $output.extra_files_path; cp $input.extra_files_path/* $output.extra_files_path; cp $input.extra_files_path/Log $output.extra_files_path/second_log; mkdir $output.extra_files_path/nested; cp $input.extra_files_path/Log $output.extra_files_path/nested/nested_log</command>
<inputs>
<param name="input" type="data" format="velvet" label="Velvet Dataset" help="Prepared by velveth."/>
</inputs>
<outputs>
<data format="velvet" name="output" label="">
</data>
</outputs>
<tests>
<test>
<param name="input" value="velveth_test1/output.html" ftype="velvet" >
<composite_data value='velveth_test1/Sequences' ftype="Sequences"/>
<composite_data value='velveth_test1/Roadmaps' ftype="Roadmaps"/>
<composite_data value='velveth_test1/Log'/>
</param>
<output name="output" file="velveth_test1/output.html">
<extra_files type="file" name="Sequences" value="velveth_test1/Sequences" />
<extra_files type="file" name="Roadmaps" value="velveth_test1/Roadmaps" />
<extra_files type="file" name="Log" value="composite_output_expected_log" />
<extra_files type="file" name="second_log" value="composite_output_expected_log" />
<extra_files type="file" name="nested/nested_log" value="composite_output_expected_log" />
</output>
</test>
</tests>
</tool>