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31 lines
1.0 KiB
XML
31 lines
1.0 KiB
XML
<tool id="EMBOSS_hmoment44" name="hmoment">
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<description>Hydrophobic moment calculation</description>
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<command>hmoment -seqall $input1 -outfile $out_file1 -window $window -aangle $aangle -graph png -auto</command>
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<inputs>
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<param format="data" name="input1" type="data">
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<label>Sequences</label>
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</param>
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<param name="window" size="5" type="text" value="10">
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<label>Window</label>
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</param>
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<param name="aangle" size="5" type="text" value="100">
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<label>Alpha helix angle (degrees)</label>
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</param>
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</inputs>
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<outputs>
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<data format="hmoment" name="out_file1" />
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</outputs>
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<tests>
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<test>
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<param name="input1" value="2.fasta"/>
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<param name="window" value="10"/>
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<param name="aangle" value="100"/>
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<output name="out_file1" file="emboss_hmoment_out.hmoment"/>
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</test>
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</tests>
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<help>
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You can view the original documentation here_.
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.. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/hmoment.html
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</help>
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</tool> |