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43 lines
1.3 KiB
XML
43 lines
1.3 KiB
XML
<tool id="EMBOSS: prettyseq80" name="prettyseq">
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<description>Output sequence with translated ranges</description>
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<command>prettyseq -sequence $input1 -outfile $out_file1 -ruler $ruler -plabel $plabel -nlabel $nlabel -width $width -auto</command>
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<inputs>
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<param format="fasta" name="input1" type="data">
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<label>Sequence</label>
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</param>
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<param name="ruler" type="select">
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<label>Add a ruler</label>
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<option value="yes">Yes</option>
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<option value="no">No</option>
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</param>
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<param name="plabel" type="select">
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<label>Number translations</label>
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<option value="yes">Yes</option>
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<option value="no">No</option>
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</param>
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<param name="nlabel" type="select">
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<label>Number DNA sequence</label>
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<option value="yes">Yes</option>
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<option value="no">No</option>
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</param>
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<param name="width" size="4" type="text" value="60">
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<label>Width of screen</label>
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</param>
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</inputs>
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<outputs>
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<data format="txt" name="out_file1" />
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</outputs>
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<help>
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.. class:: warningmark
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The input dataset needs to be sequences.
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-----
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You can view the original documentation here_.
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.. _here: http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/prettyseq.html
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</help>
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</tool>
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