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28 lines
742 B
XML
28 lines
742 B
XML
<tool id="EMBOSS: newcpgseek58" name="newcpgseek">
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<description>Reports CpG rich region</description>
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<command>newcpgseek -sequence $input1 -outfile $out_file1 -score $score -auto</command>
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<inputs>
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<param format="fasta" name="input1" type="data">
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<label>Sequence</label>
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</param>
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<param name="score" size="4" type="text" value="17">
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<label>CpG score</label>
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</param>
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</inputs>
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<outputs>
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<data format="txt" name="out_file1" />
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</outputs>
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<help>
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.. class:: warningmark
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The input dataset needs to be sequences.
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-----
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You can view the original documentation here_.
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.. _here: http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/newcpgseek.html
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</help>
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</tool>
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