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27 lines
1.0 KiB
XML
27 lines
1.0 KiB
XML
<tool id="EMBOSS: dotmatcher24" name="dotmatcher">
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<description>Displays a thresholded dotplot of two sequences</description>
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<command interpreter="perl">emboss_single_outputfile_wrapper.pl dotmatcher -asequence $input1 -bsequence $input2 -goutfile $out_file1 -windowsize $windowsize -threshold $threshold -graph png
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-auto</command>
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<inputs>
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<param format="data" name="input1" type="data">
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<label>Sequence 1</label>
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</param>
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<param format="data" name="input2" type="data">
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<label>Sequence 2</label>
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</param>
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<param name="windowsize" size="4" type="text" value="10">
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<label>Window size</label>
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</param>
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<param name="threshold" size="4" type="text" value="23">
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<label>Threshold</label>
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</param>
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</inputs>
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<outputs>
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<data format="png" name="out_file1" />
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</outputs>
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<help>
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You can view the original documentation here_.
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.. _here: http://emboss.sourceforge.net/apps/release/4.0/emboss/apps/dotmatcher.html
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</help>
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</tool> |