mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-18 01:01:21 +08:00
Nicola Soranzo
0e7b0eb83b
Useful when creating virtual environments for several Python versions (e.g. `.venv38`, `.venv312`), which otherwise are linted by tools like black, isort and flake8.
190 lines
3.7 KiB
Plaintext
190 lines
3.7 KiB
Plaintext
.hg*
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# Downloaded and locally built eggs
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eggs
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scripts/scramble/build
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scripts/scramble/lib
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scripts/scramble/archives
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# Python virtualenv
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.venv*/
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# Python build artifacts
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build
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dist
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lib/galaxy.egg-info
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.eggs
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# Generated static content
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lib/galaxy/web/framework/static/maps
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lib/galaxy/web/framework/static/scripts
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lib/galaxy/web/framework/static/style
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lib/galaxy/web/framework/meta.json
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# Misc. data, config, cache files
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/database/
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# Python bytecode
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*.pyc
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# Galaxy runtime files
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*.lock
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*.log
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*.pid
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celerybeat-schedule
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# Celery state files
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celerybeat-schedule.*
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# Tool Shed runtime files
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tool_shed_webapp.lock
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tool_shed_webapp.log
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tool_shed_webapp.pid
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hgweb.config*
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lib/tool_shed/scripts/bootstrap_tool_shed/user_info.xml
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# Reports runtime files
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reports_webapp.lock
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reports_webapp.log
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reports_webapp.pid
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# Jupyter runtime files
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.ipynb_checkpoints
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# Config files
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universe_wsgi.ini
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reports_wsgi.ini
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reports.ini
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tool_shed_wsgi.ini
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datatypes_conf.xml
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tool_conf.xml
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external_service_types_conf.xml
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migrated_tools_conf.xml
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shed_tool_conf.xml
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tool_data_table_conf.xml
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tool_sheds_conf.xml
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integrated_tool_panel.xml
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openid_conf.xml
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shed_tool_data_table_conf.xml
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job_conf.xml
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data_manager_conf.xml
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shed_data_manager_conf.xml
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object_store_conf.xml
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job_metrics_conf.xml
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workflow_schedulers_conf.xml
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config/*
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config/plugins/interactive_environments/**/*.ini
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config/plugins/**/.cache
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config/plugins/**/.parcel-cache
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!config/plugins
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static/welcome.html.*
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static/welcome.html
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static/client_build_hash.txt
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lib/galaxy_test/selenium/jupyter/galaxy_selenium_context.yml
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# Tool data
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tool-data/annotation_profiler_options.xml
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tool-data/annotation_profiler_valid_builds.txt
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tool-data/gatk_annotations.txt
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tool-data/gd.restriction_enzymes.txt
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tool-data/gd.species.txt
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tool-data/shared/igv/igv_build_sites.txt
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tool-data/shared/rviewer/rviewer_build_sites.txt
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tool-data/shared/ncbi/builds.txt
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tool-data/shared/ucsc/builds.txt
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tool-data/shared/ucsc/manual_builds.txt
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tool-data/shared/ensembl/builds.txt
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tool-data/shared/ucsc/publicbuilds.txt
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tool-data/shared/ucsc/ucsc_build_sites.txt
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tool-data/*.loc
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tool-data/genome/*
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tool-data/*.sample
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tool-data/testtoolshed.g2.bx.psu.edu/
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tool-data/toolshed.g2.bx.psu.edu/
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tool-data/**/*.fa
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# Test output
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.pytest_cache/
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assets/
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test-data-cache
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run_api_tests.html
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run_cwl_tests.html
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run_framework_tests.html
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run_functional_tests.html
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run_integration_tests.html
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run_selenium_tests.html
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run_toolshed_tests.html
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test/tool_shed/tmp/*
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.coverage
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htmlcov
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run_unit_tests.html
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test/unit/**.log
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.tox
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tool_test_output.html
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tool_test_output.json
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# Project files
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*.kpf
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.idea
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.vscode
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client/**/jsconfig.json
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vetur.config.js
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.pre-commit-config.yaml
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# Chrom len files
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*.len
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# JARs
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tool-data/shared/jars/
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# JS, Local node_modules, and bower_components directories
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static/maps
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static/plugins
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static/scripts
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node_modules
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bower_components
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client/src/libs/*
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# Old galaxy client location
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client/galaxy
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# Documentation build files
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doc/build
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doc/schema.md
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doc/source/admin/config_logging_default_yaml.rst
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doc/source/dev/schema.md
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client/docs/dist
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# Webpack stats
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client/webpack-stats.json
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# Packages
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packages/*/build
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packages/*/dist
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packages/*/*.egg-info
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# Standalone script + main, or build into dist
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config/plugins/**/static/dist
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config/plugins/**/static/script.js
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config/plugins/**/static/main.css
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config/plugins/**/static/plugin_build_hash.txt
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config/plugins/**/static/*.map
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# Viz-specific build artifacts to ignore (until these are removed from codebase)
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config/plugins/visualizations/annotate_image/static/jquery.contextMenu.css
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config/plugins/visualizations/nvd3/nvd3_bar/static/nvd3.js
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config/plugins/visualizations/h5web/static/script.css
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# CWL conformance tests
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lib/galaxy_test/api/cwl/test_cwl_conformance_v1_?.py
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test/functional/tools/cwl_tools/v1.?/
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# Involucro tool
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involucro
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# Misc
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*.orig
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.DS_Store
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*.rej
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*~
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