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31 lines
1.1 KiB
XML
31 lines
1.1 KiB
XML
<tool id="markdown_report_from_script" name="markdown_report_from_script" version="1.0">
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<command><![CDATA[
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echo "Some contents for standard output";
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echo "Hello World" > '$output_text';
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cp '$__tool_directory__/data/1.bed' '$output_table';
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cp '$__tool_directory__/data/rgWebLogo3_test.jpg' '$output_image';
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python '$__tool_directory__/markdown_report_simple_script.py'
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]]></command>
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<inputs>
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<param name="title" type="text" label="Title"/>
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</inputs>
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<outputs>
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<data name="output_text" format="txt"/>
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<data name="output_image" format="jpg"/>
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<data name="output_table" format="tsv"/>
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<data name="output_report" format="tool_markdown" from_work_dir="output_report.md" />
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</outputs>
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<tests>
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<test>
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<param name="title" value="foobar" />
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<output name="output_report" ftype="tool_markdown">
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<assert_contents>
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<has_line line="# Dynamically Generated Report" />
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</assert_contents>
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</output>
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</test>
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</tests>
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<help>
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</help>
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</tool>
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