Nicola Soranzo e3942053f4 Merge branch 'release_24.1' into release_24.2

2025-02-16 17:26:50 +00:00

..

biotools

Move things around

2022-11-16 17:01:28 +01:00

data

Fix type annotation of code using XML etree

2024-01-26 18:41:09 +00:00

mulled

Merge branch 'release_24.0' into release_24.1

2025-02-16 17:19:15 +00:00

tool_directories/r-tool-dir

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toolbox

Enable `warn_unused_ignores` mypy option

2024-04-16 01:12:58 +01:00

upgrade

Integrate tool test validation into upgrade advisor.

2024-08-24 16:12:32 -04:00

verify

Merge branch 'release_24.1' into dev

2024-10-16 11:26:07 +01:00

__init__.py

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framework_tool_checks.yml

Tool Request models.

2024-09-30 13:25:02 -04:00

parameter_specification.yml

Pydantic models for parameter validators.

2024-10-22 07:49:37 -04:00

test_assertion_models.py

Modeling from assertions.

2024-09-13 16:23:10 -04:00

test_conda_resolution.py

Restore resolution of Conda environments generated from non-lowercase package names

2023-07-27 13:23:32 +01:00

test_container_description.py

container description: make identifier non-optional

2023-06-14 15:28:37 +01:00

test_container_resolution.py

tests: add integration and fix unit tests

2023-06-14 15:28:36 +01:00

test_cwl_util.py

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test_cwl.py

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test_docker_volumes.py

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test_edam_util.py

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test_loader_directory.py

Test improvements

2023-01-30 10:38:29 +01:00

test_ontologies.py

Allow multiple xrefs in biotools_mappings.tsv.

2024-10-02 00:10:44 -04:00

test_output_checker.py

fix test exit code default

2024-03-01 22:45:39 -05:00

test_output_models.py

Fix #18554.

2024-08-05 09:43:15 -04:00

test_parameter_convert.py

Fix param models for dynamic options and truevalue/falsevalue

2024-10-22 07:49:37 -04:00

test_parameter_specification.py

models for tool landing request state...

2024-10-22 07:49:37 -04:00

test_parameter_test_cases.py

Tool Request models.

2024-09-30 13:25:02 -04:00

test_parameter_validator_models.py

Pydantic models for parameter validators.

2024-10-22 07:49:37 -04:00

test_parsing.py

Improvements to help terms & tool help.

2024-08-23 11:03:13 -04:00

test_required_files.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_resolution_cache.py

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test_singularity_util.py

containers: do not mount /tmp/

2023-06-14 15:28:38 +01:00

test_test_definition_parsing.py

Fix planemo timeout handling

2025-01-08 13:16:50 +02:00

test_test_format_model.py

Models for YAML test format.

2024-09-24 12:47:07 -04:00

test_test_parsing.py

use asserts also in test

2024-03-09 15:10:52 +01:00

test_tool_deps.py

Fix new UP031 errors from ruff 0.4.2

2024-04-29 00:09:38 +01:00

test_tool_linters.py

strip text

2024-11-26 17:18:44 +01:00

test_tool_loader.py

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test_toolbox_view_parsing.py

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test_toolbox_view_sources.py

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test_util.py

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test_verify_function.py

Initial unit test for copying test data.

2022-09-23 09:11:40 -04:00

test_verify_hid.py

Initial unit test for copying test data.

2022-09-23 09:11:40 -04:00

test_verify_script.py

Remove use of mktemp

2023-06-12 09:48:38 -04:00

test_verify.py

Add pin_labels attribute for image_diff comparison method

2024-03-29 12:01:34 +01:00

test_version.py

Vendorise `packaging.versions.LegacyVersion`

2023-05-07 17:30:59 +01:00

test_wait.py

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util.py

Tool Request models.

2024-09-30 13:25:02 -04:00