John Chilton 355bb281e2 Finish swapping unencoded ids with order_index in workflows API. ...

Running a workflow or showing a workflow can both restore the previous behavior by passing legacy=True as an API parameter. By changing these two endpoints in tandem I believe backward compatiblity for most existing code should be maintained unless:

 - The external application saved these workflow IDs previously and re-runs workflows without refetching the workflow definition. I could imagine Refinery for instance might do this and will have to update indexed workflows or add legacy=True to workflow requests.
 - The external application contacted the database directly after using this API endpoint to fetch more information about the step (seems unlikely).

See conversation:
 - http://dev.list.galaxyproject.org/workflow-API-step-order-vs-step-id-in-bioblend-td4668367.html

Rebased with changes suggested by @nsoranzo.

2015-12-20 14:39:20 +00:00

..

workflows_format_2

Implement nested workflows.

2015-12-16 15:22:18 +00:00

__init__.py

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

helpers.py

Fix missing assertion pointed out @nsoranzo.

2015-12-04 12:42:49 +00:00

test_authenticate.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_dataset_collections.py

WIP: Improved state tracking of HDCA in history panel.

2015-09-18 16:28:22 +01:00

test_datasets.py

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

test_datatypes.py

Expose datatype converter information via datatype API.

2014-12-25 12:24:23 -05:00

test_framework.py

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

test_histories.py

Revert "Revert "[WIP] Mega flake8 linting""

2015-07-12 21:25:44 +01:00

test_history_contents_provenance.py

Fix provenance controller for non-admins.

2014-05-21 14:33:24 -05:00

test_history_contents.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_jobs.py

Wait on jobs and history in certain API test cases.

2015-12-03 16:33:45 +00:00

test_libraries.py

add more API tests for data libraries

2015-11-12 12:34:57 -05:00

test_page_revisions.py

Moved API tests to live under test/ rather than test/functional/. Removed test for DNAse flanked genes. Added test for UCSC table browser.

2014-04-30 15:35:57 -04:00

test_pages.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_search.py

Remove abstraction around requests now that it is a required dependency.

2014-09-04 20:34:52 -04:00

test_tool_data.py

Tool data API testing fixes.

2015-03-02 22:36:24 -05:00

test_tools.py

Various small API testing fixes/improvements.

2015-12-10 00:06:53 +00:00

test_users.py

API tests for authenticate and some of users endpoints.

2014-08-04 21:45:02 -04:00

test_workflow_1.ga

Test for importing workflows with annotations.

2014-12-13 12:58:34 -05:00

test_workflow_2.ga

Allow specifing workflow parameter replacements by step UUID.

2014-12-15 22:20:12 -05:00

test_workflow_extraction.py

Merge pull request #1096 from jmchilton/format_2

2015-11-20 22:05:42 -05:00

test_workflow_map_reduce_pause.ga

Add file missed with pull request 505.

2014-12-01 21:18:56 -05:00

test_workflow_matching_lists.ga

Add workflow test demonstrating failure when multiple lists with different identifiers are using in workflows.

2014-08-27 16:32:26 -04:00

test_workflow_pause.ga

Implement pause module for workflows.

2014-11-13 13:47:39 -05:00

test_workflow_topoambigouity_auto_laidout.ga

Test cases and test workflows to verify workflow import stability.

2014-08-04 09:33:40 -04:00

test_workflow_topoambigouity.ga

Test cases and test workflows to verify workflow import stability.

2014-08-04 09:33:40 -04:00

test_workflow_validation_1.ga

Synchronize validation of workflows between web and API controllers.

2014-09-10 11:51:10 -04:00

test_workflow_with_runtime_input.ga

More complete testing of workflow import and export.

2014-09-18 09:50:52 -04:00

test_workflows_from_yaml.py

Implement nested workflows.

2015-12-16 15:22:18 +00:00

test_workflows.py

Finish swapping unencoded ids with order_index in workflows API.

2015-12-20 14:39:20 +00:00