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synced 2026-09-22 06:16:50 +08:00
mvdbeek
b346c82344
Fixes:
```
KeyError: 'chrom'
File "galaxy/tools/__init__.py", line 1909, in handle_single_execution
rval = self.execute(
File "galaxy/tools/__init__.py", line 2005, in execute
return self.tool_action.execute(
File "galaxy/tools/actions/__init__.py", line 392, in execute
) = self._collect_inputs(tool, trans, incoming, history, current_user_roles, collection_info)
File "galaxy/tools/actions/__init__.py", line 327, in _collect_inputs
inp_data, all_permissions = self._collect_input_datasets(
File "galaxy/tools/actions/__init__.py", line 268, in _collect_input_datasets
tool.visit_inputs(param_values, visitor)
File "galaxy/tools/__init__.py", line 1748, in visit_inputs
visit_input_values(self.inputs, values, callback)
File "galaxy/tools/parameters/__init__.py", line 224, in visit_input_values
callback_helper(
File "galaxy/tools/parameters/__init__.py", line 159, in callback_helper
new_value = callback(**args)
File "galaxy/tools/actions/__init__.py", line 191, in visitor
input_datasets[prefix + input.name] = process_dataset(value)
File "galaxy/tools/actions/__init__.py", line 126, in process_dataset
data = data.get_converted_dataset(trans, target_ext, target_context=parent, history=history)
File "galaxy/model/__init__.py", line 4211, in get_converted_dataset
self.datatype.convert_dataset(
File "galaxy/datatypes/data.py", line 795, in convert_dataset
job, converted_datasets, *_ = converter.execute(trans, incoming=params, set_output_hid=visible, history=history)
File "galaxy/tools/__init__.py", line 2005, in execute
return self.tool_action.execute(
File "galaxy/tools/actions/__init__.py", line 453, in execute
params=wrapped_params.params,
File "galaxy/tools/parameters/wrapped.py", line 43, in params
self.wrap_values(self.tool.inputs, params, skip_missing_values=not self.tool.check_values)
File "galaxy/tools/parameters/wrapped.py", line 58, in wrap_values
value = input_values[input.name]
```
in https://sentry.galaxyproject.org/share/issue/4f2171798f214f7ba8b947eaaebe2776/