galaxy

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Files

T

mvdbeek 69a3cda018 Fix history import when parent_hda not serialized

and make sure we include the parent_hda when exporting histories.
Fixes
https://sentry.galaxyproject.org/share/issue/20ee27f675ef476588bbe8ff273eaee7/:
```
KeyError: '31e7840b5aedca43523bfcc8e2e9e56f'
  File "galaxy/jobs/__init__.py", line 2039, in finish
    task_wrapper = self.tool.exec_after_process(
  File "galaxy/tools/__init__.py", line 3100, in exec_after_process
    JobImportHistoryArchiveWrapper(self.app, job.id).cleanup_after_job()
  File "galaxy/tools/imp_exp/__init__.py", line 81, in cleanup_after_job
    model_store.perform_import(new_history, job=job, new_history=True)
  File "galaxy/model/store/__init__.py", line 416, in perform_import
    self._import_implicit_dataset_conversions(object_import_tracker)
  File "galaxy/model/store/__init__.py", line 1280, in _import_implicit_dataset_conversions
    idc.parent_hda = object_import_tracker.hdas_by_key[idc_attrs["parent_hda"]]
```

2024-09-23 11:07:20 +02:00

dataset_collections

Apply black formatting.

2022-02-03 07:42:20 -05:00

datatypes

Enable flake8-implicit-str-concat ruff rules

2024-04-29 13:37:54 +01:00

model

Fix history import when parent_hda not serialized

2024-09-23 11:07:20 +02:00

security

Enable `warn_unused_ignores` mypy option