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claudiofr
ae97462073
The test/unit/app directory tree has a test-requirements.txt file that brings in dependencies required by database utility modules imported by the unit test.
69 lines
2.7 KiB
Python
69 lines
2.7 KiB
Python
import time
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import pytest
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from beaker.cache import CacheManager
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from beaker.util import parse_cache_config_options
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import galaxy.config
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from galaxy.model.unittest_utils.beaker_testing_utils import is_cache_empty
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from galaxy.model.unittest_utils.migration_scripts_testing_utils import tmp_directory # noqa: F401
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from galaxy.model.unittest_utils.model_testing_utils import ( # noqa: F401 (url_factory is a fixture we have to import explicitly)
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create_and_drop_database,
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url_factory,
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)
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from galaxy.tool_util.deps.container_resolvers import ResolutionCache
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from galaxy.tool_util.deps.mulled.util import (
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_namespace_has_repo_name,
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mulled_tags_for,
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NAMESPACE_HAS_REPO_NAME_KEY,
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TAG_CACHE_KEY,
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)
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cache_namespace = "mulled_resolution"
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@pytest.fixture(scope="module")
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def appconfig():
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return galaxy.config.GalaxyAppConfiguration(override_tempdir=False)
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@pytest.fixture()
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def resolution_cache(url_factory, appconfig): # noqa: F811
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db_url = url_factory()
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with create_and_drop_database(db_url):
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resolution_cache = ResolutionCache()
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cache_opts = {
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"cache.type": "ext:database",
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"cache.expire": "1",
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"cache.url": db_url,
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"cache.schema_name": appconfig.mulled_resolution_cache_schema_name,
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"cache.table_name": appconfig.mulled_resolution_cache_table_name,
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}
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cm = CacheManager(**parse_cache_config_options(cache_opts)).get_cache(cache_namespace)
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cm.clear()
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resolution_cache.mulled_resolution_cache = cm
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yield resolution_cache
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assert not is_cache_empty(db_url, cache_namespace)
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cm.clear()
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assert is_cache_empty(db_url, cache_namespace)
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def test_resolution_cache_namepace_has_repo_name(resolution_cache):
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resolution_cache.mulled_resolution_cache[NAMESPACE_HAS_REPO_NAME_KEY] = ["mytool3000"]
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assert _namespace_has_repo_name("bioconda", "mytool3000", resolution_cache=resolution_cache)
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def test_resolution_cache_expires(resolution_cache):
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resolution_cache.mulled_resolution_cache[NAMESPACE_HAS_REPO_NAME_KEY] = ["mytool3000"]
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assert NAMESPACE_HAS_REPO_NAME_KEY in resolution_cache.mulled_resolution_cache
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time.sleep(1.2)
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assert NAMESPACE_HAS_REPO_NAME_KEY not in resolution_cache.mulled_resolution_cache
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def test_targets_to_mulled_name(resolution_cache):
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resolution_cache.mulled_resolution_cache[NAMESPACE_HAS_REPO_NAME_KEY] = ["mytool3000"]
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cache = resolution_cache.mulled_resolution_cache._get_cache("mulled_tag_cache", {"expire": 1})
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cache[TAG_CACHE_KEY] = {"bioconda": {"mytool3000": ["1.0", "1.1"]}}
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tags = mulled_tags_for(namespace="bioconda", image="mytool3000", resolution_cache=resolution_cache)
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assert tags == ["1.1", "1.0"]
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