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mvdbeek
969e995a9b
Include this in a workflow, and notice that the run form breaks if the history contains a dataset that trips up the dynamic parameter.
61 lines
2.4 KiB
XML
61 lines
2.4 KiB
XML
<tool id="select_from_dataset_in_conditional" name="select_from_dataset_in_conditional"
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version="0.1.0">
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<description>Create dynamic options from data sets</description>
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<command><![CDATA[
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echo select_single '$cond.select_single' > '$output'
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]]></command>
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<inputs>
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<param name="single" type="data" format="tabular" label="single" />
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<conditional name="cond">
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<param name="cond" type="select">
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<option value="single">single</option>
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</param>
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<when value="single">
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<param name="select_single" type="select" label="select_single">
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<options from_dataset="single">
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<column name="name" index="1" />
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<column name="value" index="0" />
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<validator type="no_options" message="No data is available in single" />
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</options>
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</param>
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<conditional name="inner_cond">
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<param name="inner_cond" type="select">
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<option value="single">single</option>
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</param>
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<when value="single">
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<param name="select_single" type="select" label="select_single">
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<options from_dataset="single">
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<column name="name" index="1" />
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<column name="value" index="0" />
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<validator type="no_options"
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message="No data is available in single" />
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</options>
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</param>
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</when>
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</conditional>
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</when>
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</conditional>
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</inputs>
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<outputs>
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<data name="output" format="txt" />
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</outputs>
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<tests>
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<test>
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<param name="single" value="1.tabular" />
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<conditional name="cond">
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<param name="select_single" value="chr10" />
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<conditional name="inner_cond">
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<param name="select_single" value="chr10" />
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</conditional>
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</conditional>
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<output name="output">
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<assert_contents>
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<has_text text="select_single chr10" />
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</assert_contents>
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</output>
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</test>
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</tests>
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<help>
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</help>
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</tool>
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