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galaxy/tools/emboss_5/emboss_charge.xml
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<tool id="EMBOSS_charge8" name="charge">
<description>Protein charge plot</description>
<command>charge -seqall $input1 -outfile $out_file1 -window $window -auto</command>
<inputs>
<param format="fasta" name="input1" type="data">
<label>On query</label>
</param>
<param name="window" size="4" type="text" value="5">
<label>Window Size</label>
</param>
</inputs>
<outputs>
<data format="charge" name="out_file1" />
</outputs>
<!-- <tests>
<test>
<param name="input1" value="2.fasta"/>
<param name="window" value="5"/>
<output name="out_file1" file="emboss_charge_out.charge"/>
</test>
</tests>-->
<help>
.. class:: warningmark
The input dataset needs to be sequences.
-----
You can view the original documentation here_.
.. _here: http://emboss.sourceforge.net/apps/release/5.0/emboss/apps/charge.html
</help>
</tool>