Galaxy IPython Integration

IPython Integration into Galaxy

Requirements

For security reasons you need to have docker installed. For a detailed instruction how to install docker, please look at the docker website.

Cpoy the template and config folder in your <GALAXY_ROOT>/config/plugins/visualizations/ipython folder and restart Galaxy.

git clone https://github.com/bgruening/galaxy-ipython.git config/plugins/viz/ipython

The IPython Visualisation Option should be visible next to the usual Charts or Trackster Options in your Visualisation menue.