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Nicola Soranzo
f865e8359f
Also: - dos2unix test/functional/tools/for_workflows/head.xml - Single-quote text and data params in `<command/>` - Remove deprecated `interpreter` attribute of `<command />`
24 lines
776 B
XML
24 lines
776 B
XML
<tool id="genbank" name="Connect to Genbank" version="1.0.0">
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<!-- <description>queries genbank</description> -->
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<command interpreter="python">genbank.py $mode "$text" $output</command>
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<inputs>
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<param name="mode" type="select">
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<option value="nucleotide">nucleotide database</option>
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<option value="protein">proteins database</option>
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<label>Get sequences from the</label>
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</param>
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<param name="text" type="text" value="6273291" label="with accession ID" />
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</inputs>
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<outputs>
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<data format="fasta" name="output" />
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</outputs>
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<help>
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At the moment this tool allows the following simple searches:
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- by GI: **51594135**
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- by accession: **CF622840**
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- using text: **human hbb1** (this feature is experimental)
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</help>
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</tool>
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