mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-17 16:41:31 +08:00
Nicola Soranzo
18221ae931
Fix errors in `first_startup` jobs: https://travis-ci.org/galaxyproject/galaxy/jobs/316342622#L1029 Introduced in https://github.com/galaxyproject/galaxy/pull/4475
108 lines
1.7 KiB
Bash
108 lines
1.7 KiB
Bash
#!/bin/bash
|
|
#
|
|
# Init file for Galaxy (http://galaxyproject.org/)
|
|
# Suitable for use on Fedora and derivatives (RedHat Enterprise Linux, Scientific Linux, CentOS)
|
|
#
|
|
# Contributed by Brad Chapman
|
|
#
|
|
# chkconfig: 2345 98 20
|
|
# description: Galaxy http://galaxyproject.org/
|
|
|
|
#--- loading functions
|
|
. /etc/init.d/functions
|
|
#--- config
|
|
|
|
SERVICE_NAME="galaxy"
|
|
RUN_AS="galaxy"
|
|
RUN_IN="/path/to/galaxy-dist"
|
|
|
|
#--- main actions
|
|
|
|
start() {
|
|
echo "Starting $SERVICE_NAME... "
|
|
cmd="cd $RUN_IN && sh run.sh --daemon"
|
|
case "$(id -un)" in
|
|
$RUN_AS)
|
|
eval "$cmd"
|
|
;;
|
|
root)
|
|
su - $RUN_AS -c "$cmd"
|
|
;;
|
|
*)
|
|
echo "*** ERROR *** must be $RUN_AS or root in order to control this service" >&2
|
|
exit 1
|
|
esac
|
|
echo "...done."
|
|
}
|
|
|
|
stop() {
|
|
echo -n "Stopping $SERVICE_NAME... "
|
|
|
|
cmd="cd $RUN_IN && sh run.sh --stop-daemon"
|
|
|
|
case "$(id -un)" in
|
|
$RUN_AS)
|
|
eval "$cmd"
|
|
;;
|
|
root)
|
|
su - $RUN_AS -c "$cmd"
|
|
;;
|
|
*)
|
|
echo "*** ERROR *** must be $RUN_AS or root in order to control this service" >&2
|
|
exit 1
|
|
esac
|
|
|
|
echo "done."
|
|
}
|
|
|
|
galaxy_status() {
|
|
if [[ $(grep '\[server:' $RUN_IN/config/galaxy.ini|awk -F'(:)|(])' '{ print $2 }') == 'main' ]]
|
|
then
|
|
echo -n "$SERVICE_NAME status: "
|
|
status -p $RUN_IN/galaxy.pid galaxy
|
|
else
|
|
for proc in $(grep '\[server:' $RUN_IN/config/galaxy.ini|awk -F'(:)|(])' '{ print $2 }')
|
|
do
|
|
status -p $RUN_IN/${proc}.pid ${proc}
|
|
done
|
|
fi
|
|
}
|
|
|
|
notsupported() {
|
|
echo "*** ERROR*** $SERVICE_NAME: operation [$1] not supported"
|
|
}
|
|
|
|
usage() {
|
|
echo "Usage: $SERVICE_NAME start|stop|restart|status"
|
|
}
|
|
|
|
|
|
#---
|
|
|
|
case "$1" in
|
|
start)
|
|
start "$@"
|
|
;;
|
|
stop)
|
|
stop
|
|
;;
|
|
restart|reload)
|
|
stop
|
|
start
|
|
;;
|
|
status)
|
|
set +e
|
|
galaxy_status
|
|
exit $?
|
|
;;
|
|
'')
|
|
usage >&2
|
|
exit 1
|
|
;;
|
|
*)
|
|
notsupported "$1" >&2
|
|
usage >&2
|
|
exit 1
|
|
;;
|
|
esac
|