mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-16 15:45:04 +08:00
Also simplify updaterst target in doc/Makefile
Partially revert commit b4feb85f11 : re-add
doc/source/lib/galaxy.webapps.galaxy.api.rst and
doc/source/lib/galaxy.webapps.tool_shed.api.rst and include them in
doc/source/api/api.rst and doc/source/api/ts_api.rst respectively to
simplify doc maintenance.
326 lines
6.2 KiB
ReStructuredText
326 lines
6.2 KiB
ReStructuredText
galaxy\.util package
|
|
====================
|
|
|
|
.. automodule:: galaxy.util
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
Subpackages
|
|
-----------
|
|
|
|
.. toctree::
|
|
|
|
galaxy.util.backports
|
|
galaxy.util.log
|
|
galaxy.util.pastescript
|
|
|
|
Submodules
|
|
----------
|
|
|
|
galaxy\.util\.aliaspickler module
|
|
---------------------------------
|
|
|
|
.. automodule:: galaxy.util.aliaspickler
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.biostar module
|
|
----------------------------
|
|
|
|
.. automodule:: galaxy.util.biostar
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.bunch module
|
|
--------------------------
|
|
|
|
.. automodule:: galaxy.util.bunch
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.checkers module
|
|
-----------------------------
|
|
|
|
.. automodule:: galaxy.util.checkers
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.compression\_utils module
|
|
---------------------------------------
|
|
|
|
.. automodule:: galaxy.util.compression_utils
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.dbkeys module
|
|
---------------------------
|
|
|
|
.. automodule:: galaxy.util.dbkeys
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.dictifiable module
|
|
--------------------------------
|
|
|
|
.. automodule:: galaxy.util.dictifiable
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.expressions module
|
|
--------------------------------
|
|
|
|
.. automodule:: galaxy.util.expressions
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.filelock module
|
|
-----------------------------
|
|
|
|
.. automodule:: galaxy.util.filelock
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.handlers module
|
|
-----------------------------
|
|
|
|
.. automodule:: galaxy.util.handlers
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.hash\_util module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.hash_util
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.heartbeat module
|
|
------------------------------
|
|
|
|
.. automodule:: galaxy.util.heartbeat
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.image\_util module
|
|
--------------------------------
|
|
|
|
.. automodule:: galaxy.util.image_util
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.inflection module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.inflection
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.json module
|
|
-------------------------
|
|
|
|
.. automodule:: galaxy.util.json
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.jstree module
|
|
---------------------------
|
|
|
|
.. automodule:: galaxy.util.jstree
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.lazy\_process module
|
|
----------------------------------
|
|
|
|
.. automodule:: galaxy.util.lazy_process
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.multi\_byte module
|
|
--------------------------------
|
|
|
|
.. automodule:: galaxy.util.multi_byte
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.none\_like module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.none_like
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.object\_wrapper module
|
|
------------------------------------
|
|
|
|
.. automodule:: galaxy.util.object_wrapper
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.odict module
|
|
--------------------------
|
|
|
|
.. automodule:: galaxy.util.odict
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.oset module
|
|
-------------------------
|
|
|
|
.. automodule:: galaxy.util.oset
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.permutations module
|
|
---------------------------------
|
|
|
|
.. automodule:: galaxy.util.permutations
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.plugin\_config module
|
|
-----------------------------------
|
|
|
|
.. automodule:: galaxy.util.plugin_config
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.properties module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.properties
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.sanitize\_html module
|
|
-----------------------------------
|
|
|
|
.. automodule:: galaxy.util.sanitize_html
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.simplegraph module
|
|
--------------------------------
|
|
|
|
.. automodule:: galaxy.util.simplegraph
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.sleeper module
|
|
----------------------------
|
|
|
|
.. automodule:: galaxy.util.sleeper
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.sockets module
|
|
----------------------------
|
|
|
|
.. automodule:: galaxy.util.sockets
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.specs module
|
|
--------------------------
|
|
|
|
.. automodule:: galaxy.util.specs
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.sqlite module
|
|
---------------------------
|
|
|
|
.. automodule:: galaxy.util.sqlite
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.streamball module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.streamball
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.submodules module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.submodules
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.template module
|
|
-----------------------------
|
|
|
|
.. automodule:: galaxy.util.template
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.topsort module
|
|
----------------------------
|
|
|
|
.. automodule:: galaxy.util.topsort
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.ucsc module
|
|
-------------------------
|
|
|
|
.. automodule:: galaxy.util.ucsc
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.validation module
|
|
-------------------------------
|
|
|
|
.. automodule:: galaxy.util.validation
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
galaxy\.util\.xml\_macros module
|
|
--------------------------------
|
|
|
|
.. automodule:: galaxy.util.xml_macros
|
|
:members:
|
|
:undoc-members:
|
|
:show-inheritance:
|
|
|
|
|