mvdbeek caea1912b9 Use plain config/attribute access; unify tool-file detection with tool_util ...

GalaxyAppConfiguration materializes every schema option, so the
hasattr/getattr guards around tool_configs, shed_tool_config_file,
migrated_tools_config, root, tool_search_index_dir and use_lazy_toolbox
were dead (StandaloneInstallationTarget's Config stub gains the
use_lazy_toolbox attribute the real config carries). The
tool_source_url getattr had no matching schema option — the default
sqlalchemy store is now disk-path only; full URLs remain available via
named tool_source_stores entries.

getattr(entry, "source_path") was hiding a real gap: ToolIndexEntry
never carried the field, so LazyTool.config_file always materialised.
The populator now stamps source_path onto every entry.

discover.py's duplicated _looks_like_a_tool is replaced by the real
galaxy.tool_util.loader_directory.looks_like_a_tool (threading
enable_beta_tool_formats), and the works-without-galaxy fallback for
MODEL_TOOLS_PATH is gone — the populator always runs with galaxy
importable.

2026-07-28 17:27:23 +02:00

..

galaxy

Use plain config/attribute access; unify tool-file detection with tool_util

2026-07-28 17:27:23 +02:00

galaxy_ext

…

galaxy_test

test driver: reset_shed_tools calls reconcile_index before reload

2026-07-28 17:27:17 +02:00

tool_shed

Drop <repeat default=N> seeding

2026-07-22 08:11:31 +03:00

tool_shed_client

Drop support for Python 3.8

2026-06-25 15:12:05 +01:00