mirror of
https://github.com/galaxyproject/galaxy.git
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41 lines
2.3 KiB
XML
41 lines
2.3 KiB
XML
<?xml version="1.0"?>
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<!--
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If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
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the initial response. If value of 'URL_method' is 'post', any additional params coming back in the
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initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
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-->
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<tool name="UCSC Main" id="ucsc_table_direct1" tool_type="data_source" URL_method="post">
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<description>table browser</description>
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<command interpreter="python">data_source.py $output</command>
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<inputs action="http://genome.ucsc.edu/cgi-bin/hgTables" check_values="false" method="get">
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<display>go to UCSC Table Browser $GALAXY_URL</display>
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<param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
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<param name="tool_id" type="hidden" value="ucsc_table_direct1" />
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<param name="sendToGalaxy" type="hidden" value="1" />
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<param name="hgta_compressType" type="hidden" value="none" />
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<param name="hgta_outputType" type="hidden" value="bed" />
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</inputs>
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<request_param_translation>
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<request_param galaxy_name="URL" remote_name="URL" missing="" />
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<request_param galaxy_name="dbkey" remote_name="db" missing="?" />
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<request_param galaxy_name="organism" remote_name="org" missing="unknown species" />
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<request_param galaxy_name="table" remote_name="hgta_track" missing="unknown table" />
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<request_param galaxy_name="description" remote_name="hgta_regionType" missing="no description" />
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<request_param galaxy_name="data_type" remote_name="hgta_outputType" missing="tabular" >
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<data_type_translation>
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<format galaxy_format="tabular" remote_format="primaryTable" />
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<format galaxy_format="tabular" remote_format="selectedFields" />
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<format galaxy_format="wig" remote_format="wigdata" />
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<format galaxy_format="interval" remote_format="tab" />
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<format galaxy_format="html" remote_format="hyperlinks" />
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<format galaxy_format="fasta" remote_format="sequence" />
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</data_type_translation>
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</request_param>
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</request_param_translation>
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<uihints minwidth="800"/>
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<outputs>
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<data name="output" format="tabular" />
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</outputs>
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<options sanitize="False" refresh="True"/>
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</tool>
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