Wolfgang Maier bd0f257452 Switch data_source.py to modern tool-provided metadata ...

Allows moving all data source tools using the script to profile 20.09.
For more recent profiles data_source.py would have to work outside of
Galaxy's Python environment.

2024-02-08 16:43:39 +01:00

..

__init__.py

Rev mypy.

2021-04-23 14:49:53 -04:00

access_libraries.xml

Make tool version explicit (Job runner would assume 1.0.0)

2015-03-09 15:21:48 +00:00

biomart_test.xml

Switch data_source.py to modern tool-provided metadata

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biomart.xml

Switch data_source.py to modern tool-provided metadata

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cbi_rice_mart.xml

Switch data_source.py to modern tool-provided metadata

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data_source.py

Switch data_source.py to modern tool-provided metadata

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ebi_sra.xml

Switch data_source.py to modern tool-provided metadata

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eupathdb.xml

Switch data_source.py to modern tool-provided metadata

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fly_modencode.xml

Switch data_source.py to modern tool-provided metadata

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flymine_test.xml

Switch data_source.py to modern tool-provided metadata

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flymine.xml

Switch data_source.py to modern tool-provided metadata

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genbank.py

Apply black to tools as well

2022-02-03 09:12:13 -05:00

genbank.xml

Add EDAM topics to unannotated tools

2020-10-30 17:59:45 +01:00

gramene_mart.xml

Switch data_source.py to modern tool-provided metadata

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hapmapmart.xml

Switch data_source.py to modern tool-provided metadata

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hbvar.xml

Switch data_source.py to modern tool-provided metadata

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import.py

Apply black to tools as well

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import.xml

Add EDAM topics to unannotated tools

2020-10-30 17:59:45 +01:00

intermine.xml

Switch data_source.py to modern tool-provided metadata

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metabolicmine.xml

Switch data_source.py to modern tool-provided metadata

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microbial_import_code.py

Replace file_name property with get_file_name function

2023-11-08 17:17:14 -05:00

microbial_import.py

Apply black to tools as well

2022-02-03 09:12:13 -05:00

microbial_import.xml

Add EDAM topics to unannotated tools

2020-10-30 17:59:45 +01:00

modmine.xml

Switch data_source.py to modern tool-provided metadata

2024-02-08 16:43:39 +01:00

mousemine.xml

Switch data_source.py to modern tool-provided metadata

2024-02-08 16:43:39 +01:00

ncbi_datasets.xml

Add @TOOL_VERSION@ token for NCBI Datasets Genomes

2022-05-04 16:34:09 +02:00

ratmine.xml

Switch data_source.py to modern tool-provided metadata

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sra.xml

Switch data_source.py to modern tool-provided metadata

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ucsc_tablebrowser_archaea.xml

Switch data_source.py to modern tool-provided metadata

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ucsc_tablebrowser_test.xml

Switch data_source.py to modern tool-provided metadata

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ucsc_tablebrowser.xml

Switch data_source.py to modern tool-provided metadata

2024-02-08 16:43:39 +01:00

upload.py

Fix new E721 errors from ruff 0.0.290

2023-09-20 01:43:40 +01:00

upload.xml

Fix upload1 tool

2023-12-01 19:57:38 +01:00

worm_modencode.xml

Switch data_source.py to modern tool-provided metadata

2024-02-08 16:43:39 +01:00

wormbase_test.xml

Switch data_source.py to modern tool-provided metadata

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wormbase.xml

Switch data_source.py to modern tool-provided metadata

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yeastmine.xml

Switch data_source.py to modern tool-provided metadata

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zebrafishmine.xml

Switch data_source.py to modern tool-provided metadata

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