mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-10-24 02:04:04 +08:00
Much more information on planemo PR that I used to build a test bed for this: https://github.com/galaxyproject/planemo/pull/392 Also syncs galaxy with planemo shared library changed.
28 lines
1.3 KiB
Plaintext
28 lines
1.3 KiB
Plaintext
<dependency_resolvers>
|
|
<!-- the default configuration, first look for dependencies installed from the toolshed -->
|
|
<tool_shed_packages />
|
|
<!-- then look for env.sh files in directories according to the "galaxy packages" schema.
|
|
These resolvers can take a base_path attribute to specify where to look for
|
|
package definitions, but by default look in the directory specified by tool_dependency_dir
|
|
in Galaxy's config/galaxy.ini -->
|
|
<galaxy_packages />
|
|
<galaxy_packages versionless="true" />
|
|
<conda />
|
|
<conda versionless="true" />
|
|
|
|
<!-- Example configuration of modules dependency resolver, uses Environment Modules -->
|
|
<!--
|
|
<modules modulecmd="/opt/Modules/3.2.9/bin/modulecmd" />
|
|
<modules modulecmd="/opt/Modules/3.2.9/bin/modulecmd" versionless="true" default_indicator="default" />
|
|
Attributes are:
|
|
* modulecmd - path to modulecmd
|
|
* versionless - default: false - whether to resolve tools using a version number or not
|
|
* find_by - directory or avail - use the DirectoryModuleChecker or AvailModuleChecker
|
|
* prefetch - default: true - in the AvailModuleChecker prefetch module info with 'module avail'
|
|
* default_indicator - default: '(default)' - what indicate to the AvailModuleChecker that a module is the default version
|
|
-->
|
|
<!-- other resolvers
|
|
<tool_shed_tap />
|
|
<homebrew />
|
|
-->
|
|
</dependency_resolvers> |