Files
galaxy/run.sh
T

49 lines
1.2 KiB
Bash
Executable File

#!/bin/sh
cd `dirname $0`
python ./scripts/check_python.py
[ $? -ne 0 ] && exit 1
SAMPLES="
external_service_types_conf.xml.sample
datatypes_conf.xml.sample
reports_wsgi.ini.sample
tool_conf.xml.sample
tool_data_table_conf.xml.sample
universe_wsgi.ini.sample
tool-data/shared/ucsc/builds.txt.sample
tool-data/*.sample
static/welcome.html.sample
"
# Create any missing config/location files
for sample in $SAMPLES; do
file=`echo $sample | sed -e 's/\.sample$//'`
if [ ! -f "$file" -a -f "$sample" ]; then
echo "Initializing $file from `basename $sample`"
cp $sample $file
fi
done
# explicitly attempt to fetch eggs before running
FETCH_EGGS=1
for arg in "$@"; do
[ "$arg" = "--stop-daemon" ] && FETCH_EGGS=0; break
done
if [ $FETCH_EGGS -eq 1 ]; then
python ./scripts/check_eggs.py quiet
if [ $? -ne 0 ]; then
echo "Some eggs are out of date, attempting to fetch..."
python ./scripts/fetch_eggs.py
if [ $? -eq 0 ]; then
echo "Fetch successful."
else
echo "Fetch failed."
exit 1
fi
fi
fi
python ./scripts/paster.py serve universe_wsgi.ini $@