mirror of
https://github.com/galaxyproject/galaxy.git
synced 2026-09-21 13:50:20 +08:00
25 lines
820 B
XML
25 lines
820 B
XML
<tool id="genbank" name="Connect to Genbank">
|
|
<!-- <description>queries genbank</description> -->
|
|
<command interpreter="python">genbank.py $mode "$text" $output</command>
|
|
<inputs>
|
|
<param name="mode" type="select">
|
|
<option value="nucleotide">nucleotide database</option>
|
|
<option value="protein">proteins database</option>
|
|
<label>Get sequences from the</label>
|
|
</param>
|
|
<param name="text" size="40" type="text" value="6273291">
|
|
<label>with accession ID</label>
|
|
</param>
|
|
</inputs>
|
|
<outputs>
|
|
<data format="fasta" name="output" />
|
|
</outputs>
|
|
<help>
|
|
At the moment this tool allows the following simple searches:
|
|
|
|
- by GI: **51594135**
|
|
- by accession: **CF622840**
|
|
- using text: **human hbb1** (this feature is experimental)
|
|
</help>
|
|
|
|
</tool> |