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Wolfgang Maier
bd0f257452
Allows moving all data source tools using the script to profile 20.09. For more recent profiles data_source.py would have to work outside of Galaxy's Python environment.
21 lines
882 B
XML
21 lines
882 B
XML
<?xml version="1.0"?>
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<tool name="EBI SRA" id="ebi_sra_main" tool_type="data_source" version="1.0.1" profile="20.09">
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<description>ENA SRA</description>
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<edam_operations>
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<edam_operation>operation_0224</edam_operation>
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</edam_operations>
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<!-- This paython script imports the file into Galaxy -->
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<command><![CDATA[
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python '$__tool_directory__/data_source.py' '$output' $__app__.config.output_size_limit
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]]></command>
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<!-- The URL where Galaxy will forwards the user when this tool is accessed from the Get Data menu -->
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<inputs action="https://www.ebi.ac.uk/ena/data/search" check_values="false" method="get">
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<display>go to EBI SRA server $GALAXY_URL</display>
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</inputs>
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<uihints minwidth="800"/>
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<outputs>
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<data name="output" format="auto"/>
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</outputs>
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<options sanitize="False" refresh="True"/>
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</tool>
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