M Bernt 2428b9db97 Merge branch 'dev' into topic/linter-overhaul

2024-02-15 09:40:48 +01:00

..

biotools

Move things around

2022-11-16 17:01:28 +01:00

data

Fix type annotation of code using XML etree

2024-01-26 18:41:09 +00:00

mulled

Merge `Target with CondaTarget`

2023-06-02 19:44:20 +01:00

tool_directories/r-tool-dir

Systematic handling of remotely required tool files.

2021-08-10 14:04:32 -04:00

toolbox

Apply black formatting.

2022-02-03 07:42:20 -05:00

verify

Fix type annotation of code using XML etree

2024-01-26 18:41:09 +00:00

__init__.py

…

test_conda_resolution.py

Restore resolution of Conda environments generated from non-lowercase package names

2023-07-27 13:23:32 +01:00

test_container_description.py

container description: make identifier non-optional

2023-06-14 15:28:37 +01:00

test_container_resolution.py

tests: add integration and fix unit tests

2023-06-14 15:28:36 +01:00

test_cwl_util.py

Move unit tests to more appropriate packages.

2020-07-14 09:24:42 -04:00

test_cwl.py

Fix `parse_requirements_and_containers()` for CWL and YAML tools

2022-06-22 03:25:56 +01:00

test_docker_volumes.py

Drop containers package, move to tool_util

2022-03-24 19:51:59 +01:00

test_edam_util.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_loader_directory.py

Test improvements

2023-01-30 10:38:29 +01:00

test_ontologies.py

Allow legacy EDAM mappings.

2022-03-07 16:54:54 -05:00

test_output_checker.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_parsing.py

Implement default locations for data and collection parameters.

2023-11-01 11:52:44 -04:00

test_required_files.py

Replace `unittest.TestCase` with pytest-based partial re-implementation

2022-09-27 03:34:58 +01:00

test_resolution_cache.py

Merge branch 'release_22.01' into release_22.05

2022-08-30 20:32:39 +02:00

test_singularity_util.py

containers: do not mount /tmp/

2023-06-14 15:28:38 +01:00

test_test_parsing.py

Allow parsing lists of simple test assertions

2023-12-06 13:23:17 +01:00

test_tool_deps.py

Merge `Target with CondaTarget`

2023-06-02 19:44:20 +01:00

test_tool_linters.py

implement listing of linters

2024-01-17 15:07:23 +01:00

test_tool_loader.py

Merge branch 'release_22.01' into dev

2022-02-21 17:00:55 +00:00

test_toolbox_view_parsing.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_toolbox_view_sources.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_util.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

test_verify_function.py

Initial unit test for copying test data.

2022-09-23 09:11:40 -04:00

test_verify_hid.py

Initial unit test for copying test data.

2022-09-23 09:11:40 -04:00

test_verify_script.py

Remove use of mktemp

2023-06-12 09:48:38 -04:00

test_verify.py

Fix pytest warning

2022-11-08 20:23:57 +00:00

test_version.py

Vendorise `packaging.versions.LegacyVersion`

2023-05-07 17:30:59 +01:00

test_wait.py

Apply black formatting.

2022-02-03 07:42:20 -05:00

util.py

Replace `GALAXY_TEST_INCLUDE_SLOW env variable with external_dependency_management` pytest marker

2022-11-03 21:43:37 +00:00